OverlappingChromatogram.h

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#ifndef __KOME_OBJECTS_OVERLAPPING_CHROMATOGRAM_H__
#define __KOME_OBJECTS_OVERLAPPING_CHROMATOGRAM_H__


#include "Chromatogram.h"

#include <vector>


namespace kome {
    namespace objects {

        class DATA_OBJECTS_CLASS OverlappingChromatogram : public Chromatogram {
        public:
            OverlappingChromatogram();

            virtual ~OverlappingChromatogram();

        protected:
            std::vector< Chromatogram* > m_chroms;

            std::vector< double > m_dMinX;
            std::vector< double > m_dMaxX;
            std::vector< double > m_dMinY;
            std::vector< double > m_dMaxY;

            bool    *m_bFlags;
            double  *m_dInts;
            int     m_nAllocLen;

        public:
            void clearChromatograms();

            void addChromatogram( Chromatogram* chrom );

            void removeChromatogram( Chromatogram* chrom );

        public:
            void update();

        protected:
            int searchChromatogram( Chromatogram* chrom );

        protected:
            virtual void onGetXYData( kome::core::XYData* const xyData );

            virtual void onGetSpectra(
                DataSet& dataSet,
                const double startRt,
                const double endRt,
                const SearchType startSearch,
                const SearchType endSearch
            );

            virtual double onGetMass( const unsigned int index );

            virtual int onGetMsStage( const unsigned int index );

            virtual double onGetPrecursor( const unsigned int index );
        };
    }
}

#endif  // __KOME_OBJECTS_OVERLAPPING_CHROMATOGRAM_H__