xy data operation class More...

#include <XYDataOperation.h>

Inheritance diagram for kome::objects::XYDataOperation:

Public Member Functions
	XYDataOperation ()
	constructor

virtual	~XYDataOperation ()
	destructor

void	setName (const char *name)
	sets name More...

const char *	getName ()
	gets name More...

void	setIndex (int index)
	set index More...

int	getIndex ()
	get index More...

void	update (kome::core::XYData &src, kome::core::XYData &dst, Chromatogram &chrom)
	updates xy data More...

void	update (kome::core::XYData &src, kome::core::XYData &dst, Spectrum &spec)
	updates xy data More...

void	update (kome::core::XYData &src, kome::core::XYData &dst, Sample &sample)
	updates xy data More...

Protected Member Functions
virtual void	onUpdate (kome::core::XYData &src, kome::core::XYData &dst, kome::objects::Chromatogram &chrom)=0
	This method is called by update method. (abstract method) More...

virtual void	onUpdate (kome::core::XYData &src, kome::core::XYData &dst, kome::objects::Spectrum &spec)=0
	This method is called by update method. (abstract method) More...

virtual void	onUpdate (kome::core::XYData &src, kome::core::XYData &dst, kome::objects::Sample &sample)=0
	This method is called by update method. (abstract method) More...

Protected Attributes
std::string	m_name

int	m_index

Detailed Description

xy data operation class

Definition at line 31 of file XYDataOperation.h.

Member Function Documentation

int kome::objects::XYDataOperation::getIndex ( )

get index

Returns: operation index

Definition at line 51 of file XYDataOperation.cpp.

                              {
     return m_index;
 }

const char * kome::objects::XYDataOperation::getName ( )

gets name

Returns: name

Definition at line 41 of file XYDataOperation.cpp.

                                      {
     return m_name.c_str();
 }

void kome::objects::XYDataOperation::onUpdate	(	kome::core::XYData &	src,
		kome::core::XYData &	dst,
		kome::objects::Chromatogram &	chrom
	)

protectedpure virtual

This method is called by update method. (abstract method)

Parameters

[in]	src	source xy data
[out]	dst	the object to store updated xy data
[in]	chrom	chromatogram

Implemented in kome::operation::MzRangeFilter, kome::operation::BaselineSubtract, kome::operation::Normalization, and kome::operation::Filter.

void kome::objects::XYDataOperation::onUpdate	(	kome::core::XYData &	src,
		kome::core::XYData &	dst,
		kome::objects::Spectrum &	spec
	)

protectedpure virtual

This method is called by update method. (abstract method)

Parameters

[in]	src	source xy data
[out]	dst	the object to store updated xy data
[in]	spec	spectrum

Implemented in kome::operation::MzRangeFilter, kome::operation::BaselineSubtract, kome::operation::Normalization, and kome::operation::Filter.

void kome::objects::XYDataOperation::onUpdate	(	kome::core::XYData &	src,
		kome::core::XYData &	dst,
		kome::objects::Sample &	sample
	)

protectedpure virtual

This method is called by update method. (abstract method)

Parameters

[in]	src	source xy data
[out]	dst	the object to store updated xy data
[in]	sample	sample

Implemented in kome::operation::MzRangeFilter, kome::operation::BaselineSubtract, kome::operation::Normalization, and kome::operation::Filter.

void kome::objects::XYDataOperation::setIndex ( int index )

set index

Parameters

[in] index operation index

Definition at line 46 of file XYDataOperation.cpp.

                                          {
     m_index = index;
 }

void kome::objects::XYDataOperation::setName ( const char * name )

sets name

Parameters

[in] name name

Definition at line 36 of file XYDataOperation.cpp.

                                                 {
     m_name = NVL( name, "" );
 }

void kome::objects::XYDataOperation::update	(	kome::core::XYData &	src,
		kome::core::XYData &	dst,
		Chromatogram &	chrom
	)

updates xy data

Parameters

[in]	src	source xy data
[out]	dst	the object to store updated xy data
[in]	chrom	chromatogram

Definition at line 76 of file XYDataOperation.cpp.

   {
     // copy
     kome::core::DataPoints pt;
     pt.reserve( src.getLength() );
     for( unsigned int i = 0; i < src.getLength(); i++ ) {
         pt.addPoint( src.getX( i ), src.getY( i ) );
     }
 
     // clear
     dst.clearPoints();
 
     // update
     onUpdate( pt, dst, chrom );
 }

Here is the call graph for this function:

void kome::objects::XYDataOperation::update	(	kome::core::XYData &	src,
		kome::core::XYData &	dst,
		Spectrum &	spec
	)

updates xy data

Parameters

[in]	src	source xy data
[out]	dst	the object to store updated xy data
[in]	spec	spectrum

Definition at line 56 of file XYDataOperation.cpp.

   {
     // copy
     kome::core::DataPoints pt;
     pt.reserve( src.getLength() );
     for( unsigned int i = 0; i < src.getLength(); i++ ) {
         pt.addPoint( src.getX( i ), src.getY( i ) );
     }
 
     // clear
     dst.clearPoints();
 
     // update
     onUpdate( pt, dst, spec );
 }

Here is the call graph for this function:

void kome::objects::XYDataOperation::update	(	kome::core::XYData &	src,
		kome::core::XYData &	dst,
		Sample &	sample
	)

updates xy data

Parameters

[in]	src	source xy data
[out]	dst	the object to store updated xy data
[in]	sample	sample

Definition at line 96 of file XYDataOperation.cpp.

  {
     // copy
     kome::core::DataPoints pt;
     pt.reserve( src.getLength() );
     for( unsigned int i = 0; i < src.getLength(); i++ ) {
         pt.addPoint( src.getX( i ), src.getY( i ) );
     }
 
     // clear
     dst.clearPoints();
 
     // update
     onUpdate( pt, dst, sample );
 }